FastQCFastQC Report
Fri 16 Dec 2022
EGAF00006142104

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006142104
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences224831816
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11030690.49061961942254645No Hit
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8022880.3568391761778057No Hit
CCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4663350.2074150395155817No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3412330.1517725587378612No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3063280.1362476207548846No Hit
CCCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2884070.12827677378187435No Hit
CCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2441410.10858827916063267No Hit
CCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2334200.10381982592712767No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)