FastQCFastQC Report
Fri 16 Dec 2022
EGAF00006142188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006142188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences208471629
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12405070.5950483554767062No Hit
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7051240.33823499311745675No Hit
CCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5411240.2595672142994575No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3177350.1524116262362012No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2865900.1374719434844537No Hit
CCCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2854210.13691119571958638No Hit
CCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2345650.11251650938075607No Hit
CCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2300040.11032868170277502No Hit
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2134210.10237412209217207No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)