FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006151398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006151398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91437637
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTATG1442430.15775013958420644TruSeq Adapter, Index 19 (97% over 37bp)
GGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCATGA994550.10876812138091452No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)