FastQCFastQC Report
Mon 6 Jun 2022
EGAF00006153142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006153142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53077
Sequences flagged as poor quality0
Sequence length100
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAATACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCAATAACT1015719.13634907775496No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTCATATTTTGAAAATGTTGGT930517.531134012849257No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCAATAACT872716.44215008384046No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTTATATTTTGAAAATGTTGGT830415.645194717109106No Hit
GTAAGGTTAGTTAAATAAGTTATTGGGTTCATATTTTGAAAATGTTGGTT4450.8384045820223449No Hit
GGGGTGGAGCAAGCGTGACAAGTCCACGTATGACCCGACCGACGATATCG3830.7215931571113665No Hit
GTAAGGTTAGTTAAATAAGTTATTGGGTTTATATTTTGAAAATGTTGGTT3750.7065207151873693No Hit
GGGGAACACGATGATATTCACCACACCGCTGGCGTTCAGCGCGTAGGCTT3600.6782598865798745No Hit
AGTAAGGTTAGTTAAATATAACCAACATTTTCAAAATATGAACCCAATAA3160.5953614559978898No Hit
AGTAAGGTTAGTTAAATAAGTTATCGGGTTCATATTTTGAAAATGTTGGT2980.5614484616688962No Hit
AGTAAGGTTAGTTAAATAAGTTATCGGGTTTATATTTTGAAAATGTTGGT2700.5086949149349058No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGCTCATATTTTGAAAATGTTGGT2570.4842021968084104No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCATAACTT2530.47666597584641185No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCGATAACT2470.46536164440341393No Hit
AGTAAGGTTAGTTAAATAAGTTATGGGTTCATATTTTGAAAATGTTGGTT2400.4521732577199163No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCGATAACT2350.4427529815174181No Hit
ATACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCAATAACTTA2350.4427529815174181No Hit
AGTAAGGTTAGTTAAATAAGTTGGGTTCATATTTTGAAAATGTTGGTTAT2300.43333270531491985No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATGAGCCCAATAACT2250.42391242911242155No Hit
CCTGCCCCAGCACCTGTTTGAATCGCTATGCATCGATCATTTGCAACGCC2230.42014431863142226No Hit
ATACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCAATAACTTA2070.38999943478342786No Hit
CCTATGGTTTCAACCATGTACCGGATGTGTTCTGCCATGCGCTCCTGAAA1950.367390771897432No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATGGACCCAATAACT1930.36362266141643274No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCAACTTAT1880.3542023852139345No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGCTTATATTTTGAAAATGTTGGT1820.3428980537709366No Hit
TAATACAAAAAAAATATAACCAACATTTTCGAAATATGAACCCAATAACT1800.33912994328993723No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTCCATATTTTGAAAATGTTGGT1800.33912994328993723No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAGATATGAACCCAATAACT1770.3334777775684383No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTCATATCTTGAAAATGTTGGT1750.329709667087439No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAGTATGAACCCAATAACT1670.3146372251634418No Hit
TAATACAAAAAAAATATAACCAACATTTTCAGAATATGAACCCAATAACT1660.31275316992294216No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTCATACTTTGAAAATGTTGGT1660.31275316992294216No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTTATATCTTGAAAATGTTGGT1630.30710100420144315No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAGATATAAACCCAATAACT1610.30333289372044386No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTCTATATTTTGAAAATGTTGGT1600.30144883847994425No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAGACCCAATAACT1580.2976807279989449No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAAGCCCAATAACT1570.29579667275844523No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTCATATTTCGAAAATGTTGGT1550.292028562277446No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTCATATTCTGAAAATGTTGGT1550.292028562277446No Hit
TAATACAAAAAAAATATAACCAACATTTTCGAAATATAAACCCAATAACT1540.29014450703694633No Hit
AGTAAGGTTAGTTAAATAAGTTATGGGTTTATATTTTGAAAATGTTGGTT1530.28826045179644666No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTTATATTTCGAAAATGTTGGT1480.2788401755939484No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCATAACTT1410.2656517889104508No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTTATACTTTGAAAATGTTGGT1350.2543474574674529No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAGTATAAACCCAATAACT1330.2505793469864536No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTTATATTCTGAAAATGTTGGT1270.23927501554345576No Hit
TAATACAAAAAAAATATAACCAACATTTTCAGAATATAAACCCAATAACT1090.20536202121446198No Hit
TACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCAATAACTTAT1070.2015939107334627No Hit
TACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCAATAACTTAT1060.19970985549296305No Hit
CCTCGCTTCCGGCAATACTCGTAAACCATATCAACCAGCTCGCTGACGTT1020.19217363453096445No Hit
CCTGCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGG1000.18840552404996513No Hit
AGTAAGGTTAGTTAAATAAGTTGGGTTTATATTTTGAAAATGTTGGTTAT970.1827533583284662No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCAACTTAT850.16014469544247037No Hit
AGTAAGGTTAGTTAAATATGAACCCAATAACTTATTTAACTAACCTTACT740.1394200877969742No Hit
AGGTTAGTTAAATAAGTTATTGGGTTCATATTTTGAAAATGTTGGTTATA730.13753603255647454No Hit
AATACAAAAAAAATATAACCAACATTTTCAAAATATAAACCCAATAACTT670.12623170111347665No Hit
TAATACAAAAAAAATGTTGGTTATATTTTTTTTGTATTAAGATCGGAAGA650.12246359063247735No Hit
TAATACAAAAAAAATATAACCAACATTTTCAAAATATAACCCAATAACTT650.12246359063247735No Hit
AATACAAAAAAAATATAACCAACATTTTCAAAATATGAACCCAATAACTT640.12057953539197769No Hit
AGTAAGGTTAGTTAAATAAGTTTGGGTTCATATTTTGAAAATGTTGGTTA630.11869548015147804No Hit
AGTAAGGTTAGTTAAATAAGTTATTGGGTTATATTTTGAAAATGTTGGTT590.11115925918947943No Hit
GGGCTGGCGTTCAGCGCGTAGGCTTCGATATCGTCGGTCGGGTCATACGT580.1092752039489798No Hit
AGGTTAGTTAAATAAGTTATTGGGTTTATATTTTGAAAATGTTGGTTATA580.1092752039489798No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)