FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006154203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006154203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114473428
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG1838100.1605700145539452No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTATG1569240.13708334129733582TruSeq Adapter, Index 7 (97% over 35bp)
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT1167590.10199659610088728No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)