FastQCFastQC Report
Sat 28 May 2022
EGAF00006158566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158566
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences25051220
Sequences flagged as poor quality0
Sequence length36
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACC3328951.3288574368833135No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGG2127080.8490923795328132No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATA1329530.5307246513343462No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAAC1325270.5290241353514918No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTA1099630.4389526737619965No Hit
ACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCT959880.38316696751695123No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGC912500.3642537169846419No Hit
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAG854370.34104925827963667No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGA658380.2628135476036696No Hit
TGACCCCAATACGCAAAACTAACCCCCTAATAAAAT645010.2574764821833028No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTA600180.23958114614777243No Hit
TGATGTTCGCCGACCGTTGACTATTCTCTACAAACC519720.20746294990822806No Hit
TGGGCCTCGATCAGAAGGACTTGGGCCCCCCACGAG518050.2067963157083767No Hit
CTCAGCATTTGGGGACGCTCTCAGCTCTCGGCGCAC490970.19598646293473931No Hit
GCTCAGCATTTGGGGACGCTCTCAGCTCTCGGCGCA434760.17354843396848535No Hit
CATACCCATGGCCAACCTCCTACTCCTCATTGTACC381010.15209239310500647No Hit
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTG376840.1504278035161561No Hit
AGGGACTTAATCAACGCAAGCTTATGACCCGCACTT374590.14952964366605698No Hit
ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTC302590.12078852846288525No Hit
GACAACTCGGTGGTGGCCACTGCGCAGACCAGACTT302100.12059292920664144No Hit
TAAACCTAGCCCCAAACCCACTCCACCTTACTACCA279730.11166322438587821No Hit
ATTCCTCGTTCATGGGGAATAATTGCAATCCCCGAT277010.11057744892264729No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCC267480.10677324297978302No Hit
TCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGC260640.1040428370354817No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAAC251840.10053003406620516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)