FastQCFastQC Report
Sat 28 May 2022
EGAF00006158575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158575
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences23989613
Sequences flagged as poor quality0
Sequence length41
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC2946281.2281481989726137No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG2484521.0356648938021633No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACA1326100.5527809056361185No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCC1324930.5522931945588285No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC1047750.4367515224193071No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC895710.3733740931960845No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT817100.3406057446612415No Hit
TGACCCCAATACGCAAAATTAACCCCCTAATAAAATTAATT536910.22380936282715355No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCCTAGCC370830.1545794006764511No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATT354420.147738940182153No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT250890.1045827625481078No Hit
ACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTAC245760.10244433705537476No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)