FastQCFastQC Report
Sat 28 May 2022
EGAF00006158584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158584
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences71089679
Sequences flagged as poor quality0
Sequence length41
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC5610460.7892087963992634No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG4394750.6181980368767737No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACA3885940.5466250593141657No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT2913340.4098119503395141No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCC2597340.36536105332533575No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC2304580.32417926658523805No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC2235840.3145097898106981No Hit
TGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATT1544390.21724531911306No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT1237200.17403370185424524No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCCTAGCC1155280.16251022880550636No Hit
GGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA1127300.15857435507621295No Hit
TGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAA1099540.15466942817395476No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATT958310.13480297189132054No Hit
CATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTC793660.111642085203395No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)