FastQCFastQC Report
Sat 28 May 2022
EGAF00006158591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158591
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences34389654
Sequences flagged as poor quality0
Sequence length41
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC3319840.9653601051060298No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG2767700.8048060035730513No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT1520380.4421038955495162No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCC1492380.4339619119168806No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACA1483220.4312983201284898No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC1236050.3594249596113994No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC1223300.3557174492072529No Hit
TGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATT797300.23184298393929756No Hit
GGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA687210.19983044900655297No Hit
TTCTTGTTGTTGAAATACAACGATGGTTTTTCATATCATTG662020.19250557158847834No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT627500.18246766890995764No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCCTAGCC591680.17205174556277886No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATT466560.13566871013008738No Hit
TGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAA449360.13066720589861125No Hit
ACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTAC431470.12546505992761658No Hit
GTTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATCTC381220.11085310715833313No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTA375700.10924797324218499No Hit
CTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTC367220.10678211534201536No Hit
GACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCT365200.10619472937994665No Hit
AGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG352940.10262970368937123No Hit

[FAIL]Adapter Content

Adapter graph