FastQCFastQC Report
Sat 28 May 2022
EGAF00006158594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158594
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences31821418
Sequences flagged as poor quality0
Sequence length41
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC2532240.795765920927848No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT2526160.7938552581157761No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG2284870.7180289702991866No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACA1190390.37408452382605956No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCC898720.2824261319844389No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC847560.266348910032859No Hit
TGGGCCTCGATCAGAAGGACTTGGGCCCCCCACGAGCGGCG690830.2170959194841663No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC684700.21516954398449498No Hit
AGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG652420.20502543287040192No Hit
CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGT545550.17144113439570796No Hit
GCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAG487750.1532772675309441No Hit
GTTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATCTC482060.1514891636821464No Hit
ACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTAC456460.14344426763131676No Hit
TTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCC425510.13371811400736447No Hit
TGACCCCAATACGCAAAATTAACCCCCTAATAAAATTAATT421330.13240453332406496No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTA410090.12887232115174754No Hit
GTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCG406360.12770015465684148No Hit
CAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTG398320.1251735544908778No Hit
TCTCTCTCGGGTGGAGTCTTCTGACAGCTGGTGCGCCTGCC392000.12318747077832924No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT378850.11905503393971947No Hit
CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTG374160.1175811838429073No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCCTAGCC369040.11597220463274138No Hit
TTCTTCCCCTCTCTACAACCCTCTCTCCTCAGCGCTTCTTC366590.11520228294037682No Hit
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCA365150.11474975753751765No Hit
AGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGC362560.11393584031987514No Hit
CTCAGCATTTGGGGACGCTCTCAGCTCTCGGCGCACGGCCC361700.11366558209316756No Hit
TTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGA341900.10744335780385399No Hit
ACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGA336200.10565211141753646No Hit
ATCTCTCTCGGGTGGAGTCTTCTGACAGCTGGTGCGCCTGC322610.10138140292805305No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)