FastQCFastQC Report
Sat 28 May 2022
EGAF00006158599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158599
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences18700544
Sequences flagged as poor quality0
Sequence length41
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACA3389121.8123109145915755No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC1761240.9418121740201781No Hit
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1437060.768458928253638No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCC1334080.7133910115128201No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG1061380.5675663766786677No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT692700.3704170317184356No Hit
TGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATT603740.322846223083136No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC570940.3053066263740777No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCCTAGCC429510.22967781044230584No Hit
CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTG397990.21282268579994248No Hit
TTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGA378910.2026197740557708No Hit
TGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAA370960.1983685608290326No Hit
TAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA309950.16574384146257992No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT306890.16410752542813728No Hit
TTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTT269470.14409741235335186No Hit
CATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTC235780.12608189366041972No Hit
CTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAG233840.12504449068433518No Hit
CCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTG233460.12484128803953509No Hit
GTTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATCTC223200.11935481662993333No Hit
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCA219990.11763828902517487No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATT211830.11327477959999453No Hit
CTCAGCATTTGGGGACGCTCTCAGCTCTCGGCGCACGGCCC210860.11275607811195225No Hit
ACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTAC197080.10538730851893933No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)