FastQCFastQC Report
Sat 28 May 2022
EGAF00006158601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158601
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences34455726
Sequences flagged as poor quality0
Sequence length41
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACA5597171.624452783261627No Hit
ATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC2882800.8366679024554584No Hit
TGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCC2317300.6725442383654897No Hit
CTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT2187620.6349075332210385No Hit
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1945200.5645505771667675No Hit
AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG1523720.44222548089684716No Hit
TGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC1024170.2972423219293072No Hit
TGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATT992670.2881001549640835No Hit
CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTG711790.20658104838655844No Hit
TGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAA687690.19958656508935554No Hit
TAAACTTCGCCTTAATTTTAATAATCAACACCCTCCTAGCC665110.193033227626665No Hit
TTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGA600620.17431645468738635No Hit
AGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT567890.16481730786923485No Hit
TGGGCCTCGATCAGAAGGACTTGGGCCCCCCACGAGCGGCG548290.15912884842420677No Hit
CTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAG468740.13604124899298306No Hit
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCA462460.13421862015039243No Hit
TAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA455850.13230021622530896No Hit
CATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTC421210.12224673483878994No Hit
TTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTT413450.11999456926259514No Hit
GTTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATCTC392350.11387076853350876No Hit
TAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATT377040.10942738516088735No Hit
CTCAGCATTTGGGGACGCTCTCAGCTCTCGGCGCACGGCCC347510.10085696641539348No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)