FastQCFastQC Report
Wed 1 Jun 2022
EGAF00006158784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2317
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCAACCATCTCGTATG1114.7906776003452745TruSeq Adapter, Index 6 (97% over 38bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCAACCATCTCGTATGC160.6905481225722918TruSeq Adapter, Index 6 (97% over 37bp)
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT160.6905481225722918No Hit
CTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGC100.43159257660768235No Hit
CGTGGCGCTCGACCCTGATCGTGCTGATCTCGATCCCGCTCTGCGTGATG70.3021148036253776No Hit
GATTGACTGTAGCATCCACAGCTGCCAGTTTCACTTTTCCTTTCGTCTGC70.3021148036253776No Hit
GTTAGACATAACTGAATCCTCAAAGGAGAGGGGAAAAAAAAAACAGTTCA70.3021148036253776No Hit
GCCTGTGCAGATGCACTGGAGCAGGTTTCCTCGATTATCCTTCTTGCTCC70.3021148036253776No Hit
GGGCTGTGGGCGGGCGGCAGGGCCAGGCCGTTGAGCAGGGGTGAGGCGTA70.3021148036253776No Hit
GTTCAATTAAGTTCTTTGCATCACGCAACTGAGTGATAAGTTTAGTCTTC70.3021148036253776No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG70.3021148036253776No Hit
CGGGCACGGGACCTTCCACCCGGCCGGGGCCGACGAACCCCGAACCCCGA60.2589555459646094No Hit
CAGTGGTACAGGTACTTCCATTTGCACAGGGATGAGACAGGCAGGCATCC60.2589555459646094No Hit
GCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGT60.2589555459646094No Hit
GGCTCCGGGGACCAATTGCAGAGTCTTCATCATAGTGACGTTGGTAGTAA60.2589555459646094No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC60.2589555459646094No Hit
CAACAATGAAGTGTTCTGTGTGCTAACAACATAGCTTTTAAAAAAAAAAA60.2589555459646094No Hit
GGTGAGAGTAGGCATCCTTGCCTTGTTCAAGATCTTAGATGAAAGGCTTT60.2589555459646094No Hit
GGGGATTTCAGCTCTGTAAGAAAAAGGCTTTGTGGCTTTTAAAAAGTTCT60.2589555459646094No Hit
CGCAGCAACAACTTCCAGGTCCCTCGGAACATCAGAAACTGTTGATTGTT60.2589555459646094No Hit
CCGGTCTTCTCCTTGGGGGTCACCCGCACTCGATATCCAGTGAGCTGAAC60.2589555459646094No Hit
GCTTTACGGTAAGGATCACGCTGCCTCGGGCTTCACCCTCAGTGATGTTT50.21579628830384118No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA50.21579628830384118No Hit
ATCTGCTTGGACAGTCCACTCGGGAGGGGGTCATGGAGCCAGGACTCCCT50.21579628830384118No Hit
CAGGGCTGCCTGGAGTCTGTCTCTACCATCAGGATATAGAATCTTCCTGC50.21579628830384118No Hit
GCCAATTTTCTTAATGTAAGTGCTGACTTCCTTAACAATTTCCTCATATC50.21579628830384118No Hit
CTCGGAGTCTCAGTGATAAATACTTCGACAGGACCACTTGAGCTTGGATA50.21579628830384118No Hit
GTCAGACTGGTCTGAACAGCAGGCTGGTTCCCGTGAGGTAGCTGATGCCC50.21579628830384118No Hit
GGTGTACCTTGTGCAGATACGCAGCATCAGGATATCTAGGCAGGCAGCTT50.21579628830384118No Hit
CTTGGGAAAAAATCTGCCTACCTATTAAAATTGTGAAATAATTGTGCCCT50.21579628830384118No Hit
GGCAGCAGTCTCTAGAACTTCTCCAGAAGGAAGCCCGCTGATGTCCTCTA50.21579628830384118No Hit
GTGAAGGAGTGCCCATATGTGGGGATGCCCATGACCACCTTCTCTGATGG50.21579628830384118No Hit
GGTTTGTGTACAATATACCAAAACAGATATGGGGTTTTATCACTTTAATC50.21579628830384118No Hit
GGTCCGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGA50.21579628830384118No Hit
GCAGTCTCTAGAACTTCTCCAGAAGGAAGCCCGCTGATGTCCTCTACTCC50.21579628830384118No Hit
GCCAGACACTTAAGTGAAAGCAGAAGTGTTTGGGTGACTTTCCTACTTAA50.21579628830384118No Hit
CCAGGTGTCTCCAATTCTATAGGATGTCCTTGTGTCCTGATCGTTGCATC50.21579628830384118No Hit
GTTCGGTAATTAATGGAAATTGGCTTGCTGCTTGCGGGGCTGTCTCCACG50.21579628830384118No Hit
GGGGAGACTACTGTGTTCTCACCATAAGGAAACTGAGGCTCAGAGAGATA40.17263703064307295No Hit
CCTACCCAAATCTCATCTAGAACTGTAGTTTCCATAATCCCCACGTCGTG40.17263703064307295No Hit
CTTGAGGTGCTTTCCGAATTTGCACTCTTTTCCCTACATATGGTCCACCG40.17263703064307295No Hit
TTCCTGCCTTGTAAGGAACAAGGGGGTGATCCCCGCATCTGAGAGCTTGA40.17263703064307295No Hit
GGGGCAGAGGCACTAAACTGTCACCAGTTCTTGTCATATAATTCTGGTCA40.17263703064307295No Hit
TGCTGGGATTACAGGCATGCGCCACCACACCCGGCTAATTTTGTATTTTT40.17263703064307295No Hit
GTGACAGTTGCCTGGACATTCGGGCTCAGAGCAGTTGGGGCCTTTCCAGC40.17263703064307295No Hit
TCTCTGTAGAAATTTAAATTTTCCCCATGCTGTTTTATCATCTACCTCAT40.17263703064307295No Hit
GAAGAGCACACGTCTGAACTCCAGTCACGTCAACCATCTCGTATGCCGTC40.17263703064307295TruSeq Adapter, Index 6 (96% over 33bp)
GGAGTCCATCTCACCAGGACAGTAGAATCAGTTTCATTGACAAACTGGAG40.17263703064307295No Hit
GGGACAGTTGTCACAGGCATCCCCTATACCATCGCCATCACTGTCCTTCT40.17263703064307295No Hit
CGTACATTCTTTCTCTATATAGCTTTATATTTAGTGTCCCACCATAGAAA40.17263703064307295No Hit
GGGCTGCAGCAGTTGATTCTGATTCACGTTTCCATTCCGGAGAAGCTGGG40.17263703064307295No Hit
CAGCAGATCATTTCATATTGCTTCCGTGGAGTGTGGCGAGTCAGCTAAAT40.17263703064307295No Hit
GGAAGTGGCACAAGGCACCATTGGAATTTCCTCCTCGAGTCTGAACCAAA40.17263703064307295No Hit
CTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGAGCT40.17263703064307295No Hit
GTGAGTTTTCAGGTAAATCATCCAATACTTTAGAAGAAAGTTTTTGTTGA40.17263703064307295No Hit
GCTGGTGTGAATAACTCGTTTTTTCTAGAGCCCTTATAAATAAAATCCCC40.17263703064307295No Hit
CGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAGGGACGCA40.17263703064307295No Hit
CAGGAGTTTTTGAGACCAGCCTGGCCAACATGGCGAAACCCCATCTCTAC40.17263703064307295No Hit
CTGAGGCGGGAGGATCGCTTGAACCCAGGGGTTCAAGGCTGCAGTGAGCC40.17263703064307295No Hit
GGAGAACAATGGGAAAATAAGGTACAGAAAAAAGCAGAAAAAGTAAAGTG40.17263703064307295No Hit
CCAATACTTAAGGAAAAAGGATAAAGTAAGAGGAATGATAAAGGCTGGCT40.17263703064307295No Hit
GGGGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCT40.17263703064307295No Hit
TGAAAACTGGAAATAAAAAACACTGTGGTATTTTCATAATTTTGTATATT40.17263703064307295No Hit
GTACAGTTCAGCATGTGCCCCTCTTCATGACGCTTGTGGAATGTGTCGTT40.17263703064307295No Hit
GTGTGGATGGGGTATCTGACAGTCTGGTCAGCCAGCCAGCCGGCGTCACA40.17263703064307295No Hit
CTGGAGCAAAATGAATTTTTTTTATTGTACTTCAGGGCAACAAGTCAACA40.17263703064307295No Hit
CTGAGGTAGTCATCAAAAATGATGGCAGAATACTGATGTCTATGGAGCAG40.17263703064307295No Hit
TGAAGGGAAGCCTATAAGAGAATTCTGTAAGCCTTAAGGATCAGCATACA40.17263703064307295No Hit
GGGCCCATGAGATGGTTGTCTGAGAGAGAGCTTCTTGTCCTGTAGAGGCA40.17263703064307295No Hit
TGGCAGGAGTAATCAGAGGTGTTCTTGTGTTGTGATAAGGGTGGAGAGGT40.17263703064307295No Hit
GGCCTGCACTTCCATAGAGTTTGCTGATAATTGGTTGAACAATTTCTTCC40.17263703064307295No Hit
GTGAGATTCACAGAACTCCAGTGCTTCCTGGAAGGTGAACTGCTCAAGGC40.17263703064307295No Hit
CCTCCTTCTCCAATGTGTTCTATCCCAGCTCCAATTAGGCTGTTTCCTAT40.17263703064307295No Hit
TGAATTTTCAATGCAGACAGCTGTACGATATACGAAGACTCTGAGCTGTT40.17263703064307295No Hit
GTCAAACATAGCTTGGGCAAGTTGCTCCTTCACAGGCTGGACATCACTTT40.17263703064307295No Hit
CTGGGATGGAGTGGTGGCCCCTGCGGCCGAGGCCACTGCACTGGTGACGG40.17263703064307295No Hit
GGGGTCTTGGTAGGACGCTGATCTCAGAAGTCCCCAAAGTTCACTGTGTA40.17263703064307295No Hit
CTTGAGGTCAGGAGTTTGAGATCAGCCTAGCTGATACGGTAAAACCCTGT40.17263703064307295No Hit
CTGAAAAGACTCACACCCGAATAAGAAGCCTTTTTGGTGTTGTGTCCAGG40.17263703064307295No Hit
GCAATTAACATTAGTGTTTGTTCTCTGATGGTATCTCTGAGAATACTGGT30.1294777729823047No Hit
TGCCTCCTTCTCTTCCCTTTATATCAGTGCCTTTTTCTGCTTTCAGAGAG30.1294777729823047No Hit
TAAGGAATGTTTTTAATGTTTACCTCTACTCTGTTTCAGAACGGGTAAAC30.1294777729823047No Hit
GAGGAAGACAGGGATGAAGGTGTGAAAACAGATGTGAGGATAAGAAGACA30.1294777729823047No Hit
CCACTGCGATGATGACCACTGGCAACAGAGAGCCAGGGGTAGCCCCCTGG30.1294777729823047No Hit
CTAGGGAGGCTGAGGCAGGAGAGCTGCTTAAACCCAAGGGGCAGGGGTTG30.1294777729823047No Hit
CTGCGATGGGGGCTGCTGCTGCTGCTGCTGTAACTGCTGCTGCAGCAGCA30.1294777729823047No Hit
TGCGGTTGGTAAACAGCTGCACGAACATCGGTGAAGGGGCCAGATCCGCT30.1294777729823047No Hit
GGTAATTCTATAACCAGTAATGTCTGGGGTGGTGCTCCTCTCCCAGGAGA30.1294777729823047No Hit
CTGGTGAATCGCAGGTCAGTGGGAGGAGGAACAGCTGGGATGATGGTATC30.1294777729823047No Hit
CCAGGGGCAGTAGTCTCTAGAACTTCTCCAGAAGGAAGCCCGCTGATCTC30.1294777729823047No Hit
TGGGGGTGAGGCTGCGGTTGGTAAACAGCTGCACGAACATCGGTGAAGGG30.1294777729823047No Hit
GGCGAATAGACTATTCTGTACCCTGTGATGGGAGCCTGGGGTCTGCTCCA30.1294777729823047No Hit
TTGCCATCAAGATGTAATTCCGTAAGGGAAGGAGGAAGACCTTGAGGAAT30.1294777729823047No Hit
CATTGATGTGGATTACCATACCAGGAACAAGGATTGCCGGGCATGTGTGG30.1294777729823047No Hit
ATGATTGTAGAGAGGTTGGAGGGAGAGACAGCCAGCAGGCAGAGCCTCCT30.1294777729823047No Hit
CCAGTCTGCCCTTTCCTTCTTTTCCTCACTCGCGAGTCGGCCACCGCCGT30.1294777729823047No Hit
CAGCAGTCTCTAGAACTTCTCCAGAAGGAAGCCCGCTGATGTCCTCTACT30.1294777729823047No Hit
GGAGTTTGAAAAACTTTCCTCTAAATCCTAGAAGATGAGTGGAATAAAAT30.1294777729823047No Hit
CTGTAGTAACAATTAGAAACAAATGAAATATTCAAAAACAGTAAATTAGG30.1294777729823047No Hit
CTCAGTCGCACACAAGGCAGCTGTCTCAGGCTTTACAAGCTGTGAGACTC30.1294777729823047No Hit
GTGGAATGGAAATGAGCTGACTATAACCACGATAAAGGAAAGGTATTAGG30.1294777729823047No Hit
CTGGGATCTGGTCAGCTGGGGGAACTGTCTATACCGGGGCTCAATGTGCA30.1294777729823047No Hit
GGAAGAAAGATGGGAGTGGGAACAGGGTGGACACTGTGCAGGCTTCAGCT30.1294777729823047No Hit
GCCGTGAGTCTGTTCCAAGCTCCGGCAAAGGAGGCATCCGCCGGGCCCCT30.1294777729823047No Hit
GGGGAAGCGAGGTTGACCTGTTAGGGTGAGAAGAATTATTCGAGTGCTAT30.1294777729823047No Hit
GGGGTGAGTGGGTGCATACACAAATGTGGGATTTATTTTTTTCCTTCTTT30.1294777729823047No Hit
GGAGGGTAGCTCTGAGTAGAGCTGTCAGGGGTAGCCGGGAGTGCACACAC30.1294777729823047No Hit
GGGGAGGCAGGTTTGGCGCCACGCTGCAGACCGCCACTGCTTTTCGGTGC30.1294777729823047No Hit
CTGAGACTGTAATAAGGACATTTTCTTTTCTTTTTTTGAGACGGAGTCTT30.1294777729823047No Hit
GGGAGCTGCAGGTGGGGGTGGGAGGCTGCCAAGGGCCTCTATTGGCACCG30.1294777729823047No Hit
CTGAGGCCCACGGAGGCGACCAAAGGCCGGCGCACGGCCTGGCCGCTCAG30.1294777729823047No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT30.1294777729823047No Hit
GGTAGTTGAATGATTGGGAATCCATACAGGGAGGAAGCCACGAATGCTAA30.1294777729823047No Hit
GAGCAAAAAAAATACAAAATAATATGACTAAGTGACAATTAATAGGAACC30.1294777729823047No Hit
GCAGGGTCCCCAAGAGGAGAAGCAGGGCTCCCACCGTGTAGGCTGTGCGG30.1294777729823047No Hit
TCCTAGAGCACAGGAAGTTAACTGTTTTTAGAGATAAATGAAAATGGAAG30.1294777729823047No Hit
CTCATCCAGACTCATTTCGGCACTCTGGAGGGCCTGCTGTACAGGCCCAG30.1294777729823047No Hit
GTTAGGATAGTTAAGAAAGCTGCCTATTGGCTGGAGGGAGAGGCTTAGGC30.1294777729823047No Hit
GTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGT30.1294777729823047No Hit
GTGTCTTTAAGCAATGCAGAATTTTAACCAGGCAATATTCTTATCCGGAA30.1294777729823047No Hit
GGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTA30.1294777729823047No Hit
CCTCAGTACACGGAGCTGTTCCGGATGCCACAGCACAGCACCATGCTCAG30.1294777729823047No Hit
ACCAGGGGGACCAGCTCCACCTCTAAGTCCTGGGGCCCCTGCCAATCCAG30.1294777729823047No Hit
CGTGCCTGTTGTCATTCATCTGTGTGTACCGAGGCTGGGGGTCAGGGTCC30.1294777729823047No Hit
GCTTGATAGGCTTCAAGTTCTTGTCCAATTCATAGACAATGGGAATACCA30.1294777729823047No Hit
TCCTTAATTTCATTTTTGGATGGTTCACTGCTAGTTTATAGAAATACAGT30.1294777729823047No Hit
GCCAGGAAACGCAGGTTGGATGGTGCATCAATGGCAGTGGAGGCGTCGAT30.1294777729823047No Hit
TGCAGGGGAGCGCAGCTACTCGTATACCCTTGACCGAAGACCGGTCCTCC30.1294777729823047No Hit
CGGGGGTCGCAGCAACAACTTCCAGGTCCCTCGGAACATCAGAAACTGTT30.1294777729823047No Hit
GTAAGGTGTGAGGACTCCTTATAAGCTTTGCAATATTCTTCACATCTGTG30.1294777729823047No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT30.1294777729823047No Hit
GGCCACTTCTGGAAGCAGTGGCGCCAAGGTCTTGACACCAAGAGAAATCC30.1294777729823047No Hit
GTTTCTTGATATCCTGAAGGAAGATTCGGCCACCTCGTTGGTTCTGCAGC30.1294777729823047No Hit
GTTTGAATGTTTTAGAAGAGCGGCTGCTGAAGAGGAAGCTCATCTTCGGT30.1294777729823047No Hit
CTCAGATTAAATACTGACATTCCAAAGGAAGTAGTACCTGGATGAAATTC30.1294777729823047No Hit
GTTCTGGAACTTCTCCTCAATGCAGTTTGGAGGTGCTCTGGTACAAAGCA30.1294777729823047No Hit
GCGTCGGCGTGCAGGGTGACGTCGTGGACGTCGAAGCGCACACCCCGCAT30.1294777729823047No Hit
CCGCTGATGTCCTCTACTCCAGGGGCAGCAGTCTCTAGAACTTCTCCAGA30.1294777729823047No Hit
ATCACTTTGAACTGCCTGAAGTTCAGGAAGGTCATCAAGCTCCATGTGTT30.1294777729823047No Hit
GGTCGGCTTAACATTGCATCACTCACATTCCCTACCACTAGTCCACTACA30.1294777729823047No Hit
CAAAAAATTTCAGTGTCTTACCATCCCCACCTGATGGAATACGTTGTGCA30.1294777729823047No Hit
TGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTG30.1294777729823047No Hit
AGCCGGCATAGCACTTGTCCAGGCCGCGGCTCCAGGCGGCGTAGAGCTGG30.1294777729823047No Hit
TGGAAGAGTAAGTGTCTTAAAAGAGCCTTTTTCAAAGACTCCTTCTGCTT30.1294777729823047No Hit
GGATTCTCCACTCACTTCTGGGGCAGCGGACGCCTCGCCTTCTTGAAATG30.1294777729823047No Hit
AACAGAAATAAAGTACGCTTTATTTACGAGAAGACTCATTCTATATTCAA30.1294777729823047No Hit
CTGTCTTCCCTCAAGCATCCTGGCATTCTGGTTGTTGGAGGCAGGGGTCT30.1294777729823047No Hit
CACAACAAGTACAAACCAACGCATTGCCTAGGTAGGTCCGCTCCCACTGT30.1294777729823047No Hit
GTGGAGCCCAGGTGACACGCATGGTGTCTGGACCAATGTTGGTGAATCGC30.1294777729823047No Hit
ATGCAACGTAAATATATTAGTGGAGTGCTTGAGTGAAGGTGTTAAACTTT30.1294777729823047No Hit
TGACAGAACTGTTCTGTCTCTTGTGATGGTGGTCACATGAATCTACACAT30.1294777729823047No Hit
CGCGCTTCAGGGCCCTGTTCAACTAAGCACTCTACTCTCAGTTTACTGCT30.1294777729823047No Hit
GTGATCCTTCCGGTCTCTGCTGGTCTTGAACTTCTCTGTGCAGCCTTCTA30.1294777729823047No Hit
GGTAATCCCAGCTACTTGGGAGACTGAGGCAGGAGAATGCCTTGAACCTG30.1294777729823047No Hit
GGGCAGGGGGCTGGTGGCCGGGAAAGGCGAGAAGCCGCGGCGGCTCGGGG30.1294777729823047No Hit
CCCAGGGTTACCGGAGGCACCAGCAGGCCCAGGGGACCCAGGAGTACCAG30.1294777729823047No Hit
GCACAAGGCGCACTGAGTTGCCTGAGCACAGCCCAGGGAGCAGCTCTCAG30.1294777729823047No Hit
TGGTTCAGTAACACCCTCCACGAACTCAGAAGTGATTAAAGTAACTTCTG30.1294777729823047No Hit
CTCGACCACGGTGTCAGACACTTTGGGTGAAGGCACCACACTGAAGGTAT30.1294777729823047No Hit
GGACAACGTTGACTCTATTTAGAAACAGAACATTCTTTTTAAGGCAAAAG30.1294777729823047No Hit
CTGGTGTTAGAATTGGTGCGTGAACGGAAGTCCGTCCACGCATCCAGCTC30.1294777729823047No Hit
CCGGCGCTCAGCATCCACCCAGGTCTCGCGGTCCGGGAAGTGGCGGTAAC30.1294777729823047No Hit
GTGGAGGTTACAGGTGCCGAGACTGCACCACTGCATTCTAGCCTGCGCAA30.1294777729823047No Hit
GCCGGTTGTCAGAGGAGAAGGCCACACTCAGCACATCCTTGGTATGGCCC30.1294777729823047No Hit
GGAGTCTATAAATATTTTCATTTCCTTCAATTATATCAAGAACTGTTTTT30.1294777729823047No Hit
GGATGGGGGAAAAGAATTTAAAAGGCAAATAATTTTTTTTTCATAAAAAG30.1294777729823047No Hit

[OK]Adapter Content

Adapter graph