FastQCFastQC Report
Wed 1 Jun 2022
EGAF00006158785

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006158785
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2317
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTCAGTACGGTGTAGATCT572.4600776866637895Illumina Single End PCR Primer 1 (96% over 32bp)
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGGTCAGTACGGTGTAGATCT401.7263703064307294Illumina Single End PCR Primer 1 (96% over 31bp)
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGGTCAGTACGGTGTAGATCTC90.38843331894691413Illumina Single End PCR Primer 1 (96% over 30bp)
CAAGACGGAGCAGCCGAGCCCCGGCCACTACGGCGACCAGCCCCGAGGCT80.3452740612861459No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTCAGTACGGTGTAGATCTC80.3452740612861459Illumina Single End PCR Primer 1 (96% over 31bp)
GGTGGCAGAACTGGTGAAGCCATTGTAGATGCTGCGCTGAGTGCTCTGCG70.3021148036253776No Hit
GCCGTGAAGGCCGCGCAGATCGACAGGGTCGAGATCAGAGCCGGCTTGGC70.3021148036253776No Hit
GGAAGATGGAACTTCTGTAAAAACACTGGAAACACTCCAGCAAAGAGTGA70.3021148036253776No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG60.2589555459646094No Hit
AAGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCG60.2589555459646094No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT60.2589555459646094No Hit
CCTCTTCAAGGAGAACTACAAACCACTGCTCAACGAAATAAAAGAGGATA60.2589555459646094No Hit
GGAGATGCCAAAACAGACCAGGCACAGAAAGCTGAAGGTGCTGGAGATGC60.2589555459646094No Hit
TGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCG60.2589555459646094No Hit
GCGGCGCCGCCGCCGCCCGCGAAGACGGAGAGGGAAAGAGAGAGCCGGCT60.2589555459646094No Hit
GCCAAAGAATTCCTTGGCAGCCTGAAGCGCCAGAAGCGGCAGCTGTGGGA60.2589555459646094No Hit
CCCACAACGGCCACCCCCATAAGGCATAGGCCAAGACCATACCCGCCGAA60.2589555459646094No Hit
GCTAATTTATTTCCACTTTAGAAAAGTTAGCACATGCTTTTGAAAATCTG50.21579628830384118No Hit
CAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCG50.21579628830384118No Hit
CAGATGAGTAAGTCAGAGAATTAATTTCACAATGAAGTAATTAACACTTT50.21579628830384118No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA50.21579628830384118No Hit
ACTGCAAATGTCCAGAAGGCTTCTTGGGGGAATATTGTCAACATCGAGAC50.21579628830384118No Hit
GGTAGATTGTACTTGCCTGGGAGAAGGCAGCGGACGCATCACTTGCACTT50.21579628830384118No Hit
GAGAGCCAGAATGGACTAACCTGCCTTCCAATGCTGTTATCCCCTCTATA50.21579628830384118No Hit
GGGCAAGTATACCACGAACTCCAGTGCAGACCACCGCGTGCAGCTGGATC50.21579628830384118No Hit
GATTCCCCAACTGGCATTGACTTTTCTGATATTACTGCCAACTCTTTTAC50.21579628830384118No Hit
GACATCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTG50.21579628830384118No Hit
GTTGGATTCAGATGCCGAGGACACAGTACTTCCTCAGAAAGAAGACAGAA50.21579628830384118No Hit
GCAAACCGCTGCCATGAAGGGGGTCAGTCCTACAAGATTGGTGACACCTG50.21579628830384118No Hit
GTTCTAGAGACCACTGCCCCTGGAGTAGAGGACATCAGCGGGCTTCCTTC50.21579628830384118No Hit
ATTGGGCTTCCTGATGTCCATTCAGGATATGGGTTTGCTATTGGGAACAT50.21579628830384118No Hit
GGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTC50.21579628830384118No Hit
CTTACAATGTGAACGACACATTCCACAAGCGTCATGAAGAGGGGCACATG50.21579628830384118No Hit
GGCTGGCCGACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAAC50.21579628830384118No Hit
CTGCAATGGGCCAAACACACCTCAAATTGGCTGAGTTGAGAAAGCAGCCC50.21579628830384118No Hit
GGGGTCCCCAATGAAAAGGACAACTGCCCGCTGGTGCGGAACCCAGACCA40.17263703064307295No Hit
CCTCCCGAAGCTGCGCGCTCGGTCGAAGAGGACGACCATCCCCGATAGAG40.17263703064307295No Hit
GTTACTCGGACTACCCCGATGCATACACCACATGAAACATCCTATCATCT40.17263703064307295No Hit
GTCTCACTTTGTTGCCCAGGCTGGGGTATGGTGGCGTCTTCATAGCTCAC40.17263703064307295No Hit
TTTAAATCAAAATGTGTACTTTAATCTAAAATGTTTTAATAATCTGTATT40.17263703064307295No Hit
CACCAAGATCTGATTATAGGTCATGAAGGACCCAATTTGATGCCTCTGAA40.17263703064307295No Hit
GGCGCCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTG40.17263703064307295No Hit
CCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCA40.17263703064307295No Hit
GAAGAGCGTCGTGTAGGGAAAGAGTGTTCAGTACGGTGTAGATCTCGGTG40.17263703064307295Illumina Single End PCR Primer 1 (96% over 27bp)
ATGACCTGACCATTGCTGAGAGCAACTGCCCACGGGGGGCCCGGGTGGCT40.17263703064307295No Hit
CTGAAATCAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGGCGTTGTC40.17263703064307295No Hit
CTGCAGGGAGGCAAATGATTGATAACAGCTATCAAGTTGAGAAACTGGCA40.17263703064307295No Hit
AGGCGTTTCCTTTCATTCCCTCAGTGCTTCTCTTCTGACCTGCATGTTGA40.17263703064307295No Hit
CAAATTTCTAATTTAGCTGAAGGAAAATCAAGCAAGATGAAAAGGTAATT40.17263703064307295No Hit
CTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTTGGATACA40.17263703064307295No Hit
TGCCAAACAAGTTATTGAGCTGGCTGGAAAACAGCAAACCACCTTCACGG40.17263703064307295No Hit
CCGAGTTTGGGACCAAGGTGGAGCCCGAGTTTGAGACCCAGTTGGAGCCT40.17263703064307295No Hit
GTTTTCTCATAAATGAGGGCTGCACATTGCCTGTTCTGCTTCGAAGTATT40.17263703064307295No Hit
CTGCCCACGAGGAAATCTGCACAACCAATGAAGGGGTCATGTACCGCATT40.17263703064307295No Hit
AGCCCTGTCCAGGAGTTCACTGTGCCTGGGAGCAAGTCTACAGCTACCAT40.17263703064307295No Hit
CCTTTCCCCTTATCCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGACA40.17263703064307295No Hit
CTGAAAGGACTGAATAATTTGGCTAAGTTGGGATTGAGTTTCAACAGCAT40.17263703064307295No Hit
CCGCAGCCAGGGACCCCGGTGTCCCCCGTGCAGTACGCTCACCTGCCGCA40.17263703064307295No Hit
AAAATTCCCAAAAATGATCCCCTCAATGAAGTTCATAACTTTAACTTTTA40.17263703064307295No Hit
CATTCACAAGTGGTGGGGAGTCTTGTCATTAAGGTGTGTGTAATTTAGAG40.17263703064307295No Hit
TTGAGACAAAGTCTCGCTCTTTTGCCCAGGATGGAGTGCAGTCACACAGT40.17263703064307295No Hit
GGGATGCAGTGGCTGAAGACACAAGGAAATAAGCAAATGCTTTGCACGTG40.17263703064307295No Hit
AATCTCAAGTATCTAACTTATGTGTTTTTCACTTTCATTTAGCAAATGGA40.17263703064307295No Hit
CCGCCCCGACCTTAGCTCTCACCATCGCTCTTCTACTATGAACCCCCCTC40.17263703064307295No Hit
AAAAACTAAAACTGCAGGTCCAGATCAAACAGAAATGACTATTGAAGGCT40.17263703064307295No Hit
AATTGCGGGAAATTAGCTTAGAATGGGGTATGATACCCAAATAATGAAAT40.17263703064307295No Hit
AGAAAACAGGTCTTGATTCCCCAACTGGCATTGACTTTTCTGATATTACT40.17263703064307295No Hit
GCGCGCGCGTGTGGTGTGCGTCGGAGGGCGGCGGCGGCGGCGGCGGCGGG40.17263703064307295No Hit
GAAGAATCCTGGCATTGCAGCAAAATGGTGGAATCCCCCGCAGGAAAAAA40.17263703064307295No Hit
ACCACATGAGACTGGTGGTTACATGTTAGAGTGTGTGTGTCTTGGTAATG40.17263703064307295No Hit
GAATCAGATTGGAGATAAAGAAAAGCTGGGAGGTAAACTTTCCTCTGAAG40.17263703064307295No Hit
TTGATGTTAGTAATTTGTTTTCTTATTTTCAGGTGAAACTGTTTTGCTTG40.17263703064307295No Hit
CAAACACATCCTTCTTCATGTGGTGGCAGCATGGAAAAGTGCAGAGCAAA40.17263703064307295No Hit
CGGGACCCACCCGCTACTCGCTGACCTTTGAGGAGGCACAGCAGGCCTGC40.17263703064307295No Hit
AAGCAGGCAAGATGACCTTGCTGCCTGGGGCCTGCTCTCTCCCAGGAATT40.17263703064307295No Hit
ATCATTTTGGTAGTGGTATTTACAATGAGTTTAAATCCTGCCTGGAAAGA40.17263703064307295No Hit
GGCATCCCCACATATGGGCACTCCTTCACACTGGCCTCTGCAGAAACCAC30.1294777729823047No Hit
AGACGCTTGACTGCTGTGGCTCCAGCACACTGACTGCTTTGACCACCTCA30.1294777729823047No Hit
CTATGTTCGGACCCAAGCAAGTTAGCTAAACCAAACCAACTCCTCTGCTT30.1294777729823047No Hit
GATCTTTAGACCAGACAACTTTGTATTTGGTCAGTCTGGGGCAGGTAACA30.1294777729823047No Hit
GCCACCACGCCCGGCTAATTTTTCTATTTTTAGTGGAGATGGGAGTTCAC30.1294777729823047No Hit
GGCCACCCCGCGCCTTCCTAAGTGCTCGCCGCGGTAGCCGGCCGACGCGC30.1294777729823047No Hit
AAAAACAAATCAATTAGTACTACACATTTTCAAATTATCAGCCACGTTAA30.1294777729823047No Hit
CCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGAGAGGAGCAGAGATACA30.1294777729823047No Hit
CGGGGCGGGAGCCGGGGGGCGCAGCTAGAGAGCCCCGGAGCCGCGGCGGG30.1294777729823047No Hit
AAGGACAGCAGCCCAGGGGTCAGGACCTATGGCGTGCGCCCATCAACAGA30.1294777729823047No Hit
CACCCTCAAGGGCCACAACGGCTGGGTAACCCAGATCGCTACTACCCCGC30.1294777729823047No Hit
GCCAGTGGTGTTTAACCACGTTTACAACATCAAGCTGCCAGTGGGATCCC30.1294777729823047No Hit
ATTTATACTGTGTAATCTAATCTGGCTTCTATGGGGAAAGCAACATGTAC30.1294777729823047No Hit
CGACAACCCCCGGGAGGCATTAGAAGGGATTTTTCCCGCAGGTTGCGAAG30.1294777729823047No Hit
GCCCAGCAGGCCATGAGGAAGGCCCTCACCCTGCGCTACGCACTCCTCCC30.1294777729823047No Hit
CTGCCCCTGGAGTAGAGGACATCAGCGGGCTTCCTTCTGGAGAAGTTCTA30.1294777729823047No Hit
GTTTTGCTTGAGGGATTGACAGACTGCTTCCCCGTTCAGAAACTTCATTT30.1294777729823047No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA30.1294777729823047No Hit
GGTGGGGTAGGCGGGCAAGGCGGGCGCCGAGGTTTGCAAAGGCTCGCAGC30.1294777729823047No Hit
CAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAG30.1294777729823047No Hit
GCAGCGAGGAGTTTCTCATTGCTGGAAAACTGCAGGATGGACTCTTGCAC30.1294777729823047No Hit
CTCAGGGGCACGTGTTAAGGATGTCTCTAGGTGACTCTAACTTCCCTGGC30.1294777729823047No Hit
TGGGGGGCCTGGAGATGGAGCTCCGGCTTCGAGAACGCCTGGCTGGGCTT30.1294777729823047No Hit
GCTGTCTCCATGGACAATAGCAACAAGTATACCAAGAGCCGTGGCCGCGC30.1294777729823047No Hit
CCAAGGTCTCTTCTCCATTGTTGCTCTCTATACCCGACCTAAGGTTTGGA30.1294777729823047No Hit
CCAAGGGGCAACCCCTGATTTCCTATTCTTTTACTGCTCACTGCCTCTAG30.1294777729823047No Hit
GGAGGAGCAAGGAAAAGTGTATGTGTATGCTCTCAATCAGACAAGGTTTG30.1294777729823047No Hit
GAGCATCAACCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTCCAGGCAG30.1294777729823047No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA30.1294777729823047No Hit
CTTCCATTCTAGTTCTTTTACCAAGATTTTTGTGTGACCATGTTGACTTC30.1294777729823047No Hit
CCCTGACACAACTCTGCTAGACCTGCAAAACAACAAAATAACCGAAATCA30.1294777729823047No Hit
AGTCACTCTGCCTGTGGTTATAGGCAGAATGGAGAGAGGTTGCTCAGTTC30.1294777729823047No Hit
CTGTAGACTTGGACTTCCACATGACAACCTCATGCACGATGATAGCAGCC30.1294777729823047No Hit
GGCTGAACCTAAAGACAAGCACCTGGGACCCGCTACGGCTTTCTTGCAAA30.1294777729823047No Hit
GGTTCAAGCAATTCTGCTGCATCAGCCTCCCGAGTACCTGGGATTACAGG30.1294777729823047No Hit
CCCATCTCTGTGACTTCCTGGAGACTCACTTCCTAGATGAGGAAGTGAAG30.1294777729823047No Hit
GTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTC30.1294777729823047No Hit
CTCTGGGTGAAGATTGACCTTGACTTACTCTCTAGAGTACCTGGCCACAG30.1294777729823047No Hit
GGCAGGGCTGGCTTTCTTAGCGTGTAACTTGTGTAGCAGCACAGGGCCCA30.1294777729823047No Hit
GCGACGGGTTTGTCAGAGCACCATAACATGGTGTGGGAAGTGAAGACAAA30.1294777729823047No Hit
GGAAAACGCCTACTACCAAGACCGGTTCAGCTTTCAGGAGTACATCAAGA30.1294777729823047No Hit
CGAGACCAGCCTGGCCAACATGGTGAAATCCCGTCTCTACTAAAAATACA30.1294777729823047No Hit
GTGAAACTGGACCTCAGGGACCCCCAGGGCCTACTGGGCCTGGTGGTGAC30.1294777729823047No Hit
CTTCAACCTCCCTCACCATTGGCAGCCTAGCATTAGCAGGAATACCTTTC30.1294777729823047No Hit
AGATCAGCTACCCTCCTGTGAGAGTCTGAAGGATACTATTGCCAGAGCTC30.1294777729823047No Hit
CCTGTCACTCCACTCCCATGTCCCTTGGGAAGGTCTGAGACTAGGGCCAG30.1294777729823047No Hit
GGCACATCCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCG30.1294777729823047No Hit
GTGATCCCCGTCAACCTGCCTGGCGAGCACGGGCAGAGGCTGCCCATCAG30.1294777729823047No Hit
GGAGAGGCACCACGAGAAGTGACTTCAGACTCAGGAAGCATCGTTGTGTC30.1294777729823047No Hit
GCCAGGTGGCCGGCTGCTGCCAGGTGTTCGATGCCCTGGACGACTACGAG30.1294777729823047No Hit
GTTAAAAGTATCTGGAGTAATGTTAGATTCCTTTGAAACTCACTTATGAA30.1294777729823047No Hit
GCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCT30.1294777729823047No Hit
GTTGGTCAGGCTGGTTTCGAACTCCTGACCTCAGGTGATCCACCCGCCTC30.1294777729823047No Hit
CCCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGA30.1294777729823047No Hit
TTCTGGAGCACCAGACATGTCTGGGGAGCATTCTGGATTTCTGGACCTAA30.1294777729823047No Hit
AGCATAGATTGTCAAATGTAAATTTACTGAGCGTGTTTTATAAAAAACTC30.1294777729823047No Hit
ATGACTGGACGTGCTTCAGCCACTCTCTGCTGAATGTGTCCCCCATGCCG30.1294777729823047No Hit
GAGAGGCTGGAGAGCCTGGCGAGAGAGGCCTGAAGGGACACCGTGGCTTC30.1294777729823047No Hit
CAGCCTCCCTTATTTAGTCCGCGATGGCTTCCCTCGCGCCCCACCGTCCT30.1294777729823047No Hit
TGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGG30.1294777729823047No Hit
GGCAGCTTCTACTTCCCAAGTTCAAGCAATTCTTCTGTTTGAGCCTCCTG30.1294777729823047No Hit
GTGCTCCCTGGGTCTGGAGTAGAAGTATCATCAGTCCCAGAATCTAGCAG30.1294777729823047No Hit
AGAGGAGCACCACCCCAGACATTACTGGTTATAGAATTACCACAACCCCT30.1294777729823047No Hit
CTTTGAACTGTAACACCTCTAATCAATTCAGGAGAAACACATATCATTTA30.1294777729823047No Hit
CGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGA30.1294777729823047No Hit
GGCGGCCTGGGCGCAGGGCTACACAGGGCACGGCATTGTGGTCTCCATTC30.1294777729823047No Hit
TGTGGTCTGAGTGTATGAAATAGAAAAAAATGATCTTACTAAGTAGATAA30.1294777729823047No Hit
CGCGGGGCGGACGGGAGCGAGTATGTCCGCTCTGACTCGGCTGGCGTCTT30.1294777729823047No Hit
GCATTTTCAGTGCTAAGAAAGAATCTCTATGTTATATTTTGTTAAAATAA30.1294777729823047No Hit
TGGACAGAAACCCTACAAATGTGAAGAATGTGGCACATCTTTCTACCAAT30.1294777729823047No Hit
GAAAACCAGAACTTTTTACTTGAATCGAATTTGGGGAAGAAGAAGTATGA30.1294777729823047No Hit
GTAACCACCACTCCCAAAAATGGACCAGGACCAACAAAAACTAAAACTGC30.1294777729823047No Hit
CGCGCCCGTCCTGTCGGCCACGTCCCGCGGGGTGGCGGGCGCGCTGCGGC30.1294777729823047No Hit
CTGGACTCTGGACCATATACCATCTCCAGCTATTTACACACACCTTTCTT30.1294777729823047No Hit
GAGGACATCAGCGGGCTTCCTTCTGGAGAAGTTCTAGAGACTGCTGCCCC30.1294777729823047No Hit
ACTTTCGTGTGGATATGTGAAGCATTGGGTCGGGAACTAGCTGTAGAACA30.1294777729823047No Hit
GTCCTCCCATGACATTTTTCTCCAGTGAGCAAATGGTAGGGCAAATACAG30.1294777729823047No Hit
TTTCTGTGACAGGTAACAAATTTGGGGAAGACAGCACAATCTTCTTGAAT30.1294777729823047No Hit
GGCGGGTGGGGGAGGTTGTATCCTTCTGGCCCATGGCCAGGGCTCAGGGA30.1294777729823047No Hit
CATAAGATGGTGGCCCTGCCTTCAGGGAATGTGGGAGCCAGGTGGGAGCC30.1294777729823047No Hit
AATTTAAATATGCATAGTTATATTCAGTCCTATTAACTTTTGATTAGTAT30.1294777729823047No Hit
GCACATTCAGGATTTCATTTACCTTTTCTAAAGCAGGGTTGATGCCATTC30.1294777729823047No Hit
GTGGATCTGAGTGATGATGGTGCCTGTCAGTTTGTTTTGCAGTAATCCGT30.1294777729823047No Hit
CTTCCGCGGACCGGGCGACCCAGTGCACGGCCGCCGCGTCACTCTCGGTC30.1294777729823047No Hit
GCCGCCGCCGCCGCCTCTCCTTAGTCGCCGCCATGACGACCGCGTCCACC30.1294777729823047No Hit
GGAAGACAGAAAACAGGTCTTGATTCCCCAACTGGCATTGACTTTTCTGA30.1294777729823047No Hit

[OK]Adapter Content

Adapter graph