FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006160568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110476417
Sequences flagged as poor quality0
Sequence length101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT23113942.0922057962832015No Hit
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA7622090.6899291456926957No Hit
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC3343760.30266731043603634No Hit
GTAGTCGATATGGCGTCCATCTCGACGGAGTCGCCAGCGATAACCGGAGT1307020.11830760224600695No Hit
GCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCA1148750.1039814678276541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)