FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006160679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450232763
Sequences flagged as poor quality0
Sequence length151
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAATGGCGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT13111950.2912260296792306No Hit
CATAATGGCGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10691410.23746406033982917No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)