FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006160696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456376747
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATACGCAGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT32872270.7202880123951626No Hit
ATATACGCAGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19249450.4217885798638203No Hit
ATATACGCAGTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC7577980.16604658431469121No Hit
ATATACGCAGTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4993670.10941990434056886No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)