FastQCFastQC Report
Sat 30 Jul 2022
EGAF00006160697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456376747
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATACGCAGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT28741370.6297728836741106No Hit
ATATACGCAGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA20229320.4432592180249709No Hit
ATATACGCAGTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6161720.13501389017964144No Hit
ATATACGCAGTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4576330.10027526665375877No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)