FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006160712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454501010
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAGTGATACTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22540050.4959295910035491No Hit
ATAGTGATACTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15564670.34245622468473724No Hit
ATAGTGATACTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6216680.13678033410750837No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTAATGCGCATCTCGTATG6069700.1335464579055611TruSeq Adapter, Index 3 (97% over 35bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)