FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006160722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416443154
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTCAAGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT21956380.5272359453890795No Hit
TCACTTCAAGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15232330.36577213129069713No Hit
TCACTTCAAGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5572170.13380385645624038No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)