FastQCFastQC Report
Sat 30 Jul 2022
EGAF00006160739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432426732
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTCAAGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT21022680.48615588362839696No Hit
TCACTTCAAGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16113670.37263353089836265No Hit
TCACTTCAAGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4419610.10220482853960103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)