FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006160742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006160742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485350339
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCATCAGCGCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24800120.5109735794374298No Hit
TGCATCAGCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14296580.29456206890585895No Hit
TGCATCAGCGCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC8460020.1743074913150519No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)