FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006161141

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006161141
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437517602
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAACAAGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT20299020.4639589334739497No Hit
TTAACAAGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15665430.3580525658485393No Hit
TTAACAAGTATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4530760.10355606218558494No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)