FastQCFastQC Report
Sat 30 Jul 2022
EGAF00006161145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006161145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439413760
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAACAAGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT21873970.49779893101208306No Hit
TTAACAAGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16163400.3678400967689314No Hit
TTAACAAGTATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4883820.11114399330599024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)