FastQCFastQC Report
Tue 31 May 2022
EGAF00006164166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006164166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57974713
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGCAGTTGCA3308210.5706298192455045No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGCAGTTGC605700.10447658447226811No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)