FastQCFastQC Report
Sat 28 May 2022
EGAF00006164290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006164290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28290713
Sequences flagged as poor quality0
Sequence length75
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGCAGTTGCA1441040.509368569113122No Hit
CTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGCAGTTGCAGCCAAGCAACGCCAG293320.10368066722107712No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)