FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006164471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006164471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164912020
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGAGAGATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29897781.8129533553709425No Hit
CCCGAGAGATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA4823630.292497175160428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)