FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006165193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522239046
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAATACCATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT27996850.5360926229939537No Hit
TAAATACCATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19766470.37849467885248855No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTATG9759500.18687802213854382TruSeq Adapter, Index 7 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)