FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006165201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429414186
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCCCCTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT25847640.6019279484166832No Hit
GAATCCCCCTAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC13314440.3100605530530843No Hit
GAATCCCCCTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA12301700.2864763298714123No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)