FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006165205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515989148
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAGCGAACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29695720.5755105531793083No Hit
CATCAGCGAACTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17919810.3472904434028911No Hit
CATCAGCGAACGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC8196000.1588405498791614No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)