FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006165208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530751169
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCCCCTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT15677340.2953802255308834No Hit
GAATCCCCCTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11126200.20963119159893928No Hit
GAATCCCCCTAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6128560.11546955255034022No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)