FastQCFastQC Report
Sat 30 Jul 2022
EGAF00006165222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495750815
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAGTGATACTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26687490.5383246823305777No Hit
ATAGTGATACTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA21709570.43791294624497995No Hit
ATAGTGATACTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC8010570.1615846057661045No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)