FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006165233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445813945
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCCCCTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT28494530.6391574404430082No Hit
GAATCCCCCTAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC14530220.3259256504414639No Hit
GAATCCCCCTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA13827590.3101650398127407No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)