FastQCFastQC Report
Mon 25 Jul 2022
EGAF00006165236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520318618
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATTTTTTAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA25725190.4944122526094194No Hit
ATATTTTTTAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24991570.48031281479149374No Hit
ATATTTTTTAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6741120.12955753968427092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)