FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006165237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451036683
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT20748120.460009590838535No Hit
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14408930.31946248593709176No Hit
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6680710.14811899456967229No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)