FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006165238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451036683
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT18725800.41517243953303906No Hit
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15034420.333330315840408No Hit
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5378790.11925393660275745No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)