FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006165275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445045055
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGGGAAACTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT34126890.7668187662482847No Hit
CCTGGGAAACTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA23730540.5332165751173216No Hit
CCTGGGAAACTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7338230.16488735056274245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)