FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006165285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436037709
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTGATTAGCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT15907350.3648159246704051No Hit
AGTGATTAGCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11106480.25471374999816815No Hit
AGTGATTAGCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC4987130.11437382357221769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)