FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006165286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436037709
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTGATTAGCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT13088480.3001685342769288No Hit
AGTGATTAGCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10491290.24060510784859665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)