FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006165291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455471337
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTCTGTCGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT17961100.39434095059202373No Hit
ACGTTCTGTCGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA12039510.2643307936630928No Hit
ACGTTCTGTCGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5236170.11496157001862008No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)