FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006165303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences479892008
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATTGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26864370.5598003207421616No Hit
TCTTAATTGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19022320.39638751391750626No Hit
TCTTAATTGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5571160.11609195208768719No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)