FastQCFastQC Report
Sat 18 Jun 2022
EGAF00006165624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19971860
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCCGTTAAATTTAACATTTAGAAATAAAAAGTAAGGGACAAAGATTTT288660.1445333584353185No Hit
ATACAACACACTATACTCTATAGCTATCTAGCTATCATACCACATAGCCC281680.14103844108660885No Hit
ATACCAAACACTATAGCTCTCAAAATTTAAAGTACTAAATCCTTGAGGCC254510.12743430006018466No Hit

[FAIL]Adapter Content

Adapter graph