FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006165626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35375996
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAATGAAACTGCCCCGTCCATTCAAGAGTTTGCGAAGCCCCCCGCTTG569870.16108945738234481No Hit
ATACCAAACACTATAGCTCTCAAAATTTAAAGTACTAAATCCTTGAGGCC535960.1515038615449866No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)