FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006165709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006165709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22726062
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGCGTTAATCTCGTAT4047071.7808056670794967TruSeq Adapter, Index 10 (97% over 37bp)
GAAGAGCACACGTCTGAACTCCAGTCACCAGCGTTAATCTCGTATGCCGT305220.1343039546402716TruSeq Adapter, Index 10 (96% over 32bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)