FastQCFastQC Report
Sat 18 Jun 2022
EGAF00006166073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006166073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14928767
Sequences flagged as poor quality0
Sequence length151
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGCCCTTATTTAGAATGAAGCAAAAAAAAAGTAAGGGACAAACATACC177340.11879078828144346No Hit
AGTCCCCTCTCAAAAGTCCTTTTGCATAAAGCATCAGCGTTTCCACCGTT152810.10235942459280126No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)