FastQCFastQC Report
Tue 31 May 2022
EGAF00006166150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006166150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47702350
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG906720.19007868585090673No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC524690.1099924846469828No Hit
CCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGC502200.1052778322241986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)