FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006166961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006166961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527713905
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTGCGACAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT27745440.5257667030774942No Hit
CCTTGCGACAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA18253700.3459014406679316No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG9611070.18212652554607217TruSeq Adapter, Index 7 (97% over 34bp)
CCTTGCGACAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC8374580.1586954582900369No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)