FastQCFastQC Report
Sat 11 May 2024
EGAF00006167109

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006167109
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26511812
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT363040.1369351894921403No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT275930.10407813694514732No Hit

[OK]Adapter Content

Adapter graph