FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006167137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006167137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28826839
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA429510.1489965653188683No Hit
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT405060.14051488614481802No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT310310.10764621122697497No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)