FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006167152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006167152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24898215
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT327260.13143914131997012No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG297420.11945434642603898No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)